Databases based on sequence annotation and microRNA genomics are miRBase [ 55], human microRNA disease database [ 56], miRNAMap [ 57], and miRGen [ 58]. miRBase serves as a central database for experimentally supported mature miRNA sequences for each supported miRNA. It also provides the genomic coordinates of the predicted precursor sequences.

Official repository of miRNAs. Golden standard for miRNA nomenclature. Contains also a search and comparison engine for sequences and a target database.

Search instruction - Step 1: Identify a miRNA of interest. Step 2: Select a cell line of interest for target prediction. For target expression analysis, the expression levels of … 2015-06-01 I am trying to use miRanda database ( http://www.microrna.org/), but this database is out of reach. Is that the same for you?

Microrna database

doi:10.1002/14651858.CD011279.pub2. av M Jönsson · 2002 · Citerat av 242 — 6⇓ ), 153 consecutive cases were found by searching the patient database comprising females who had had surgery for primary invasive Sökresultat för: ❤️️www.datesol.xyz ❤️️microRNA Database Single microRNA zmf. umm. uni ❤️️ DATING SITE microRNA Database Single MicroRNA (miRNA) är en klass av 20–24 små nukleotid-RNA (sRNA) can be accessed from the Comparative Sequencing of Plant Small RNAs database 46 at Novel MicroRNA Biomarkers for Colorectal Cancer Early Diagnosis and 5-Fluorouracil Chemotherapy Resistance but Not Prognosis: A Study from Databases to av RFRA FOLKEHELSEINSTITUTTET · Citerat av 1 — kunne knyttes til endringene i miRNA uttrykk, undersøkte man effektene av bare nikotin på Cochrane Database of systematic reiews.

If you use this database, please cite: Ludwig, Nicole, et al. Distribution of miRNA expression across human tissues. Nucleic acids research 44.8 (2016):

PmiREN (Plant miRNA ENcyclopedia) is a comprehensive functional plant miRNA database. In current version, PmiREN contains 20388 miRNA loci (MIRs) belonging to 5757 families, 1365 clusters, 1668 syntenic blocks and 141327 predicted miRNA-target pairs in 88 species phylogenetically ranging from chlorophytes to angiosperms.

Mature miRNA sequences were acquired from miRBase , while animal and plant miRNA-circRNA interactions were predicted by miRanda and TargetFinder , respectively. The CircFunBase database is implemented using HTML and PHP languages with MySQL. The interface component consists of web pages designed and implemented in HTML/CSS.

2018-08-14 · A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 129, 1401–1414 (2007). CAS PubMed PubMed Central Google Scholar 32. Ha, M. & Kim, V. N. Regulation of mirPub is a database with a powerful and intuitive interface that addresses the aforementioned issues.

A collection of microRNAs/ If you use this database, please cite: Ludwig, Nicole, et al. Distribution of miRNA expression across human tissues. Nucleic acids research 44.8 (2016): The arsenal of DIANA Tools ranges from target prediction algorithms (microT v4 and microT-CDS), databases of experimentally verified miRNA targets on as downloadable files.
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2018-08-14 · A mammalian microRNA expression atlas based on small RNA library sequencing.

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An intragenic microRNA database. Genes: Search by most common gene identifiers, see examples: Official symbol: LARP7; TP53 | Entrez gene: 51574; 7157 | Ensembl

The microRNA analysis portal is a next-generation tool for exploring and analyzing miRNA-focused data in the literature Stefano Pirrò 1 , Ivana Matic 1 , 2 , OncoMir Cancer Database is a repository that allows easy and systematic comparative genomic analyses of microRNA expression sequencing data derived from over 10,000 cancer patients with associated clinical information and organ-specific controls present in The Cancer Genome Atlas database. TransmiR is a database for transcription factor (TF)-microRNA (miRNA) regulations, through which one can find regulatory relations between TFs and miRNAs.